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We develop a theory of graph algebras over general fields. This is modelled after the theory developed by Freedman et al. (2007, J. Amer. Math. Soc.20 37–51) for connection matrices, in the study of graph homomorphism functions over real edge weight and positive vertex weight. We introduce connection tensors for graph properties. This notion naturally generalizes the concept of connection matrices. It is shown that counting perfect matchings, and a host of other graph properties naturally defined as Holant problems (edge models), cannot be expressed by graph homomorphism functions with both complex vertex and edge weights (or even from more general fields). Our necessary and sufficient condition in terms of connection tensors is a simple exponential rank bound. It shows that positive semidefiniteness is not needed in the more general setting.
We analyse the behaviour of the Euclidean algorithm applied to pairs (g,f) of univariate nonconstant polynomials over a finite field $\mathbb{F}_{q}$ of q elements when the highest degree polynomial g is fixed. Considering all the elements f of fixed degree, we establish asymptotically optimal bounds in terms of q for the number of elements f that are relatively prime with g and for the average degree of $\gcd(g,f)$. We also exhibit asymptotically optimal bounds for the average-case complexity of the Euclidean algorithm applied to pairs (g,f) as above.
We introduce and study analogues of expander and hyperfinite graph sequences in the context of directed acyclic graphs, which we call ‘extender’ and ‘hypershallow’ graph sequences, respectively. Our main result is a probabilistic construction of non-hypershallow graph sequences.
Distinguishing between continuous and first-order phase transitions is a major challenge in random discrete systems. We study the topic for events with recursive structure on Galton–Watson trees. For example, let $\mathcal{T}_1$ be the event that a Galton–Watson tree is infinite and let $\mathcal{T}_2$ be the event that it contains an infinite binary tree starting from its root. These events satisfy similar recursive properties: $\mathcal{T}_1$ holds if and only if $\mathcal{T}_1$ holds for at least one of the trees initiated by children of the root, and $\mathcal{T}_2$ holds if and only if $\mathcal{T}_2$ holds for at least two of these trees. The probability of $\mathcal{T}_1$ has a continuous phase transition, increasing from 0 when the mean of the child distribution increases above 1. On the other hand, the probability of $\mathcal{T}_2$ has a first-order phase transition, jumping discontinuously to a non-zero value at criticality. Given the recursive property satisfied by the event, we describe the critical child distributions where a continuous phase transition takes place. In many cases, we also characterise the event undergoing the phase transition.
The chapter is concerned with regularities that occur in texts, in particular repetitions and symmetries. They have a strong influence on the efficiency of algorithms. The central topic is the notion of repetition of factors: squares, cubes, maximal periodicities or runs, and overlaps. Problems deal with discovering or counting of repetitions. The related algorithms are usually short but tricky. Especially problems about runs are non-trivial but show the unexpected power of combinatorics of Lyndon words. Repetitions in labeled trees are also considered. Besides repetitions some problems deal with symmetrical words (palindromes) and anti-power words.
t contains various problems that do not fit in earlier chapters but certainly deserve presentation. Several of the problems are related to problems in previous chapters, like two nonstandard problems on de Bruijn sequences, superwords of shortened permutations and problems related to peridicities and primitive words. However there are also a couple of very special unrelated problems which deserved their presence due to related interesting algorithms on texts.
The chapter deals with the most classical subject in text algorithm, namely text searching and string matching. There are several problems related to special tables occurring in fast patternmatching techniques: tables for borders, strict borders, good-suffixes, prefixes and short borders. Are also presented some versions of classical methods known as Knuth-Morris-Pratt and Boyer- Moore algorithms. Pattern matching is closely related to the computation of periods, maximal suffixes and critical positions in texts. Three problems are related to so-called non-standard stringology: parameterised and order-preserving pattern-matching. Also considered are pattern matching with errors and the related 2D-matching.
The chapter is about data structures for text indexing. They are used as fundamental tools in a large amount of algorithms, represented by special arrays and trees associated with texts. The main data structures related to text algorithmics are Suffix trees and automata, Suffix arrays as well as dictionaries of basic factors. All represent all factors of a text in a compact way. For special words they are of a very specific form. Many problems in this chapter are related to such structures with emphasis on their applications. Also de Bruijn graphs are shown as tools for creating special non-trivial words: dense and perfect words.