Soil health refers to the ongoing ability of soil as a living ecosystem to maintain environmental quality, support crop productivity, and ensure human health. Evaluating and enhancing soil health is crucial for ensuring more productive and resilient agricultural systems. The aim of this work is to assess soil health using both on-farm and computational methods. The study was carried out on a slope with textural variation at Ponta Grossa–Paraná State, Brazil. The slope was divided into three segments based on altitude and clay content: upper, middle, and lower positions. In each segment, twenty points were sampled, resulting in a total of sixty points along the slope. Soil health was analysed at these points by visual evaluation of soil structure (VESS), and samples were also collected to use the Soil Management Assessment Framework (SMAF) approach in the 0–0.10 m and 0.10–0.20 m soil layers. The indicators used in this approach were soil organic carbon, macroaggregates, bulk density, water-filled pore space, pH, phosphorus, and potassium. The data were analysed using analysis of variance, mean comparison with Tukey’s test (p < 0.05). In addition, principal component analysis was performed on the soil health index (SHI) and its components (chemical, physical, and biological) with clay content and VESS scores. The study discovered that the upper position had the highest clay content, lower visual scores (2.44), and a higher SHI (up to 0.80) compared to the middle (3.7 and 0.78) and lower positions (2.9 and 0.73). This study highlights the significant influence of soil texture, particularly clay content, on soil structural quality and health as assessed by VESS and SMAF. Higher clay content improved soil aggregation and health, while lower clay content in the middle and lower slope positions resulted in poorer structure. VESS proved to be an effective field-based tool for rapid assessment of soil health, complementing the more detailed SMAF framework. The integration of both methods is essential for the development of adaptive and sustainable soil management strategies.

Intercropping annual cash crops with grasses is a strategy that promotes both diversification and intensification of production in the same area, contributing to sustainable food systems. This study evaluated the impact of intercropping maize with different Urochloa species on maize and subsequent soybean yields over three years in the Brazilian Savannah. The treatments included: (1) maize monoculture; (2) maize intercropped with Urochloa ruziziensis; (3) maize intercropped with U. brizantha cv. Marandu; and (4) maize intercropped with U. brizantha cv. BRS Paiaguás. The evaluations included maize grain yield, land equivalent ratio (LER), forage biomass and soybean yield in succession. The results confirmed that maize intercropped with U. brizantha cv. Marandu and U. brizantha cv. BRS Paiaguás achieved grain yields comparable to monoculture. Demonstrating that these forage species do not significantly compete with maize in 2018 and 2019 in Montividiu and 2018 and 2020 in Rio Verde. In Montividiu, intercropping with U. brizantha cv. BRS Paiaguás resulted in an average LER of 1.13 over three years, highlighting its advantage in optimising land use. In addition, the intercropping system was particularly beneficial in sandy soils, where faster biomass decomposition accelerated improvements in soil structure, moisture retention, and nutrient availability, leading to earlier benefits in soybeans grain yield compared to clay soils. These findings emphasise the potential of maize-forage intercropping to enhance land-use efficiency and soil health while maintaining crop yields in tropical agroecosystems. However, site-specific management is essential to maximise benefits and minimise trade-offs. Future research should focus on long-term soil health dynamics and refining intercropping strategies to improve sustainability in different environmental conditions.

The Amazon comprises the most biodiverse region in the world, but, despite being highly threatened by human-induced environmental changes, little is known about how those changes influence the remaining forest’s extent and configuration in Brazil’s arc of deforestation. We analysed the spatial and temporal dynamics and the configuration of forest cover in Brazil’s state of Rondônia over 34 years. We calculated seven landscape metrics based on freely available satellite imagery to understand the habitat transformations. Overall, natural vegetation cover declined from 90.9% to 62.7% between 1986 and 2020, and fragmentation greatly increased, generating 78 000 forest fragments and 100 000 fragments of ‘natural vegetation’, which also includes forest. We found that c. 50% of the vegetation is within c. 1 km of the nearest forest edge, and the mean isolation between fragments is c. 2.5 km. Most natural vegetation and forest vegetation layers outside protected areas (PAs; Brazil’s ‘conservation units’) and Indigenous territories (ITs) are >10 km from the nearest PA or IT. This reduction of natural vegetation in Rondônia is posing major threats to the survival of species and is undermining the dynamics of ecosystems. Measures to control deforestation and avoid the reduction of large remnants are urgently needed.

Biological products used in soybean seed treatment can enhance soil microbial activity, thereby improving soil health. Brazil is the world‘s largest producer of soybeans and has a vast and diverse cultivation area characterized by varying weather and soil conditions. However, there is a lack of studies that have assessed the soil health response to soil biological conditioners based on calcium sulfate dihydrate applied by seed treatment at large-scale farmer-led and over extended periods in Brazilian soybean fields. To address this gap, we carried out a large-scale farmer-led study across a 3000-km transect to evaluate the soil health responses to a biological conditioner over three consecutive years. Soil health indicators including soil organic carbon, extracellular ß-glucosidase enzyme activity, soil bulk density, soil pH, available phosphorus, and exchangeable potassium were measured, interpreted, and integrated into a soil health index (SMAF-SHI) to compare experimental strips with and without of the soil biological conditioner. A dataset of 87 sampling points collected from 15 farmer-led experiments over three consecutive years of the soil biological conditioner application (i.e., 2021 corresponds to one application, 2022 to two applications, and 2023 to three applications) was analyzed. The results showed site- and year-specific alterations on soil chemical, physical, and biological indicators, as well as overall SMAF-SHI. In general, the effects of the soil biological conditioner application were subtle and statistically undetectable for most of the metrics over three consecutive years of application. However, we observed potential changes in soil organic carbon, extracellular β-glucosidase enzyme activity, and soil bulk density indicators after two and three years of the soil biological conditioner application. To further understand the long-term effects of biological conditioners on soil, we propose continued soil health monitoring over time, with a particular focus on the rhizosphere, and the inclusion of molecular biology methods to measure the abundance, diversity and functionality of the soil microbiome.

The aim of this study is to determine if the offspring of mothers with obesity, present disorders in the expression of genes related to atrophy or protein synthesis in the muscle and if these disorders are modified with the (−)-epicatechin (Epi) treatment. Six male offspring per group were randomly assigned to the control groups [C and offspring of maternal obesity (MO)] or the Epi intervention groups, Epi treatment for 13 weeks (C + Epi long or MO + Epi long), or Epi administration for two weeks (C + Epi short or MO + Epi short). The effect of Epi in the gastrocnemius tissue was evaluated, analyzing mRNA and protein levels of Murf1, MAFbx, Foxo1, NFkB, and p70S6K-alpha. After the analysis by two-way ANOVA, we found an influence of the Epi long treatment over the model, by decreasing the Murf1 gene expression in both groups treated with the flavonoid (C + Epi long and MO + Epi long) (p = 0.036). Besides, Epi long treatment over the NFκB expression, by decreasing the fold increase in both groups treated with the flavonoid (C + Epi long and MO + Epi long) (p = 0.038). We not find any interaction between the variables or changes in the MAFbx, Foxo1 mRNA, neither in the phosphorylated/total protein ratio of NFκB, Foxo1, or p70S6K-alpha. In conclusions, treatment with a long protocol of Epi, reduces the mRNA of the muscle atrophy genes Murf 1 and NFkB, in the gastrocnemius muscle; however, these changes are not maintained at protein level.

Little is known about the Chondrichthyes fauna of the state of Espírito Santo, southeastern Brazil, notably on the species composition, distribution, and biology. Historically, only a few studies have focused on these issues. Basic taxonomy is one of the main tools employed in cataloguing, organizing, and initiating other, more specific, assessments regarding regional diversity. In this context, this study presents the most comprehensive list of shark and ray species occurring in the state of Espírito Santo to date. The compiled data were obtained from specimens deposited in ichthyological collections, literature reviews, and samplings conducted at fisheries landings and onboard commercial fleet vessels. The findings indicate 79 species, comprising 51 sharks and 28 rays. A total of 53.2% of threatened Brazilian marine elasmobranch species occur in the area, indicating the importance of carrying out local studies focusing on this group. A first record for the Brazilian large-eyed stingray, Hypanus marianae, was also observed for the state, increasing the southern limit of the species known distribution, previously considered restricted to the North and Northeast coasts.

The aim of this study was to analyse the expression of genes related to the regulation of energy metabolism in skeletal muscle tissue by comparing male offspring in two age groups [at 110 and 245 postnatal days (pnd)] from a mother with obesity induced by a high-fat diet and (-)-epicatechin (Epi) administration. Four groups of six male offspring from different litters were randomly selected for the control groups [C and offspring of mothers with maternal obesity (MO)] or Epi intervention groups. We evaluated the effect of Epi on gastrocnemius tissue by analysing the mRNA and protein expression levels of Fndc5/irisin, Pgc-1α, Ucp3, and Sln. Epi significantly increased the Pgc-1α protein in the MO group of offspring at 110 pnd (p < 0.036, MO vs. MO+Epi), while at 245 pnd, Epi increased Fndc5/irisin mRNA expression in the MO+Epi group versus the MO group (p = 0.006).

No differences were detected in Fndc5/irisin, Ucp3 or Sln mRNA or protein levels (including Pgc-1α mRNA) in the offspring at 110 pnd or in Pgc-1α, Ucp3, or Sln mRNA or protein levels (including Fndc5/irisin protein) at 245 pnd among the experimental groups. In conclusion, (-)-epicatechin treatment increased Fndc5/irisin mRNA expression and Pgc-α protein levels in the gastrocnemius muscle of offspring at postnatal days 110 and 245. Furthermore, it is suggested that the flavonoid effect in a model of obesity and its impact on thermogenesis in skeletal muscle are regulated by a different pathway than Fndc5/irisin.

The aim of the study was to evaluate the effect of total mixed ration particle size (length) and breed of cow on intake dynamics, animal performance and CH4 emissions, comparing high yielding Holstein and low yielding Girolando cows. The experimental design was 2 × 2 Latin Square arranged as a crossover factorial scheme with two diets (short particle size, SPS and long particle size, LPS) and the two breed compositions. The design comprised two periods of 26 d each, where all data collection was performed at cow level. No influence of the particle size occurred for the passage rate, neutral detergent fiber digestibility, performance and milk composition, methane emissions or ruminal fermentation parameters. Girolando cows had greater dry matter intake (DMI) when fed SPS, while Holsteins had the same (P < 0.05). Girolando cows had lower dry matter digestibility when fed LPS compared to SPS, while Holsteins had the opposite effect (P < 0.05). Also, the digestibility of crude protein and non-fibrous carbohydrates decreased in Girolando cows fed LPS, but not in Holsteins (P < 0.05). Girolando cows reduced DMI by 10.6% when fed LPS diet (P < 0.05). Girolando had an increased eating rate (+24 g of DM/min; P < 0.05) compared to Holstein cows, but Holstein cows had a lower CH4 intensity (by 29.7%: P < 0.05). Girolando cows increased the dry matter intake when fed a diet with short particle size, while the same did not happen in Holsteins. Dry matter digestibility increased in Holsteins when fed long particle size, while the opposite was observed in Girolando cows. Nutrient digestibility was reduced in Girolando cows when fed short particle size. Particle size did not influence eating time, eating rate, feed trough visits, visits with intake, milk yield and composition regardless of the breed. Reducing particle size increased CH4 intensity in both breeds.

In different parts of the world, aphid populations and their natural enemies are influenced by landscapes and climate. In the Neotropical region, few long-term studies have been conducted, maintaining a gap for comprehension of the effect of meteorological variables on aphid population patterns and their parasitoids in field conditions. This study describes the general patterns of oscillation in cereal winged aphids and their parasitoids, selecting meteorological variables and evaluating their effects on these insects. Aphids exhibit two annual peaks, one in summer–fall transition and the other in winter-spring transition. For parasitoids, the highest annual peak takes place during winter and a second peak occurs in winter–spring transition. Temperature was the principal meteorological regulator of population fluctuation in winged aphids and parasitoids during the year. The favorable temperature range is not the same for aphids and parasitoids. For aphids, temperature increase resulted in population growth, with maximum positive effect at 25°C. Temperature also positively influenced parasitoid populations, but the growth was asymptotic around 20°C. Although rainfall showed no regulatory function on aphid seasonality, it influenced the final number of insects over the year. The response of aphids and parasitoids to temperature has implications for trophic compatibility and regulation of their populations. Such functions should be taken into account in predictive models.

In vitro production of embryos has gained prominence as a tool for use in wildlife conservation programmes in situ and ex situ. However, the development of this technique depends on steps that include ovarian stimulation, collection and oocyte maturation. The purpose of this study was to assess the feasibility of an ovarian stimulation protocol for follicular aspiration, the efficiency of videolaparoscopy for follicular aspiration and test a medium for in vitro oocyte maturation for the species Mazama gouazoubira. Five females were submitted to repeated ovarian stimulation (hormone protocol using controlled internal drug release), and estradiol benzoate on D0 and eight injections of follicle-stimulating hormone, once every 12 h, from D4 onwards at 30-day intervals. Fourteen surgical procedures were performed in superstimulated females, resulting in the collection of 94 oocytes and an average of 17.1 ± 9.1 follicles observed, 13.5 ± 6.6 follicles aspirated and 7.2 ± 3.7 oocytes collected per surgery. After collection, the oocytes were submitted to in vitro maturation for 24 h and stained with Hoechst 33342 dye to evaluate their nuclear status; 64.5% of the oocytes reached MII and 16.1% were spontaneously activated by parthenogenesis. The nuclear status of oocytes that did not undergo in vitro maturation was evaluated; 80.9% were found to be immature.

Accurate estimates of methane (CH4) production by cattle in different contexts are essential to developing mitigation strategies in different regions. We aimed to: (i) compile a database of CH4 emissions from Brazilian cattle studies, (ii) evaluate prediction precision and accuracy of extant proposed equations for cattle and (iii) develop specialized equations for predicting CH4 emissions from cattle in tropical conditions. Data of nutrient intake, diet composition and CH4 emissions were compiled from in vivo studies using open-circuit respiratory chambers, SF6 technique or the GreenFeed® system. A final dataset containing intake, diet composition, digestibility and CH4 emissions (677 individual animal observations, 40 treatment means) obtained from 38 studies conducted in Brazil was used. The dataset was divided into three groups: all animals (GEN), lactating dairy cows (LAC) and growing cattle and non-lactating dairy cows (GCNL). A total of 54 prediction equations available in the literature were evaluated. A total of 96 multiple linear models were developed for predicting CH4 production (MJ/day). The predictor variables were DM intake (DMI), gross energy (GE) intake, BW, DMI as proportion of BW, NDF concentration, ether extract (EE) concentration, dietary proportion of concentrate and GE digestibility. Model selection criteria were significance (P < 0.05) and variance inflation factor lower than three for all predictors. Each model performance was evaluated by leave-one-out cross-validation. The Intergovernmental Panel on Climate Change (2006) Tier 2 method performed better for GEN and GCNL than LAC and overpredicted CH4 production for all datasets. Increasing complexity of the newly developed models resulted in greater performance. The GCNL had a greater number of equations with expanded possibilities to correct for diet characteristics such as EE and NDF concentrations and dietary proportion of concentrate. For the LAC dataset, equations based on intake and animal characteristics were developed. The equations developed in the present study can be useful for accurate and precise estimation of CH4 emissions from cattle in tropical conditions. These equations could improve accuracy of greenhouse gas inventories for tropical countries. The results provide a better understanding of the dietary and animal characteristics that influence the production of enteric CH4 in tropical production systems.

Several studies have shown that the Brazilian Northeast is a region with high rates of inbreeding as well as a high incidence of autosomal recessive diseases. The elaboration of public health policies focused on the epidemiological surveillance of congenital anomalies and rare genetic diseases in this region is urgently needed. However, the vast territory, socio-demographic heterogeneity, economic difficulties and low number of professionals with expertise in medical genetics make strategic planning a challenging task. Surnames can be compared to a genetic system with multiple neutral alleles and allow some approximation of population structure. Here, surname analysis of more than 37 million people was combined with health and socio-demographic indicators covering all 1794 municipalities of the nine states of the region. The data distribution showed a heterogeneous spatial pattern (Global Moran Index, GMI = 0.58; p < 0.001), with higher isonymy rates in the east of the region and the highest rates in the Quilombo dos Palmares region – the largest conglomerate of escaped slaves in Latin America. A positive correlation was found between the isonymy index and the frequency of live births with congenital anomalies (r = 0.268; p < 0.001), and the two indicators were spatially correlated (GMI = 0.50; p < 0.001). With this approach, quantitative information on the genetic structure of the Brazilian Northeast population was obtained, which may represent an economical and useful tool for decision-making in the medical field.

A commercial drinkable yogurt with and without 4% of added trehalose (as cell protectant) was spray-dried obtaining a powder with low water activity (aw). Total bacterial count in the powder was between 8.48–8.90 log cfu/g. The dried yogurt was stored: (i) at 38 °C and aw = 0.33; (ii) at 38 °C in hermetically sealed flasks (aw = 0.21/0.22); (iii) in a cyclic temperature chamber (10–20 °C) in hermetically sealed flasks (aw = 0.21/0.22). Whole milk was then fermented by adding an inoculum of spray-dried yogurt after storage under these different conditions. The kinetics of acidification showed the presence of a lag time which was strongly dependent on storage conditions. The data was fitted with a logistic type equation from which the lag time was calculated. To evaluate structural differences among samples, Fourier Transform Infrared spectra (FTIR) were recorded. Partial Least Squares (PLS) models enabled a good correlation between lag time of fermentation and FTIR spectra. The lag time for yogurt powder stored at aw about 0.21/0.22 and cyclic temperature 10–20 °C remained approximately constant over the 12 weeks of storage, while all the other conditions resulted in a dramatic increase. The addition of trehalose had a small influence on lag time and, therefore, as a protectant of lactobacilli.