The Brazil nut tree Bertholletia excelsa is an icon of Amazon conservation through sustainable use. Moderate disturbance, such as that caused by swidden agriculture, favours this heliophilic species. Our systematic literature review of Bertholletia studies and historical records addresses the following questions: do slash-and-burn farming systems increase Bertholletia density and growth? What do historical records reveal about the links between Bertholletia life history and human occupation? And what policies and regulations shape the current context for harnessing this synergistic potential for sustainable use? Compared to mature forests, slash-and-burn fallow seedling/sapling densities (11–82 individuals ha–1, with a mean of 29 individuals ha–1) are greater and faster-growing. Extant Bertholletia trees that were cut and burned during swidden preparation resprout as forked individuals and supplement new seeds buried by Dasyprocta spp. The presence of large forked Bertholletia trees and the occurrence of anthropogenic soils, particularly brown soils associated with Brazil nut tree groves, provide evidence that extant Bertholletia groves may be islands of active and passive agroecological management by ancestral Indigenous populations and local communities. This supports the notion that conservation through sustainable use can maintain Amazonian megadiversity. Furthermore, fire has been used in the Amazon since the onset of crop cultivation (including Bertholletia) c. 4500 years ago, suggesting that a more effective approach than banning fires would be to implement a systematic and methodical fire and fuel management strategy, given the ineffectiveness of command-and-control policies in this regard. The 124 conservation units and Indigenous lands in the Amazon containing Brazil nut trees reinforce the importance of policies to create protected areas. Evidence suggests that the presence of an Amazonian biocultural forest – a phenomenon resulting from the interaction between human activities and natural processes – can be sustainably used to promote what might be termed ‘sociobiodiversity conservation’.

We introduce the concept of ‘irrational paths’ for a given subshift and useit to characterize all minimal left ideals in the associated unital subshift algebra. Consequently, we characterize the socle as the sum of the ideals generated by irrational paths. Proceeding, we construct a graph such that the Leavitt path algebra of this graph is graded isomorphic to the socle. This realization allows us to show that the graded structure of the socle serves as an invariant for the conjugacy of Ott–Tomforde–Willis subshifts and for the isometric conjugacy of subshifts constructed with the product topology. Additionally, we establish that the socle of the unital subshift algebra is contained in the socle of the corresponding unital subshift C*-algebra.

The age at first calving (AFC) is an important trait to be considered in breeding programmes of dairy buffaloes, where new approaches and technologies, such as genomic selection, are constantly applied. Thus, the objective of this study was to compare the predictive ability of different genomic single-step methods using AFC information from Murrah buffaloes. From a pedigree file containing 3320 buffaloes, 2247 cows had AFC records and 553 animals were genotyped. The following models were performed: pedigree-based BLUP (PBLUP), single-step GBLUP (ssGBLUP), weighted single-step GBLUP (WssGBLUP), and single-step Bayesian regression methods (ssBR-BayesA, BayesBπ, BayesCπ, Bayes-Lasso, and BayesRR). To compare the methodologies, the accuracy and dispersion of (G)EBVs were assessed using the LR method. Accuracy estimates for the genotyped animals ranged from 0.30 (PBLUP) to 0.39 (WssGBLUP). Predictions with the traditional model (PBLUP) were very dispersed from what was expected, while BayesCπ (0.99) and WssGBLUP (1.00) obtained the lowest dispersion. The results indicate that the use of genomic information can improve the genetic gain for AFC by increasing the accuracy and reducing inflation/deflation of predictions compared to the traditional pedigree-based model. In addition, among all genomic single-step models studied, WssGBLUP and single-step BayesA were the most advantageous methods to be used in the genomic evaluation of AFC of buffaloes from this population.

The more restrictive regulations of pesticides in Europe have led to an increase in conservation biological control (CBC) research. However, little attention has been paid to the main determinants of Lobesia botrana parasitism. The Douro Demarcated Region landscape offers scope for the use of CBC. The study was conducted between 2002 and 2015 aiming at: (i) identifying parasitoids associated with L. botrana and evaluating their impact as biological control agents in each generation of the pest, and (ii) evaluating the effect of both the proportion of ecological infrastructures (EI) near the vineyards, and the impact of management practices (chemical treatments and ground cover) on the parasitism of L. botrana. A total of 3226 larvae/pupae of L. botrana were collected (15% were parasitized and 485 parasitoids emerged). A complex of 16 taxa of parasitoids was identified, the majority belonging to Hymenoptera. The most abundant were Elachertus sp. (Eulophidae), Campoplex capitator Aubert (Ichneumonidae), and Brachymeria tibialis (Walker) (Chalcididae), which represented 62.5, 12.6, and 12.0% of the total assemblage of parasitoids which emerged, respectively. The percentage of parasitism ranged from 0.0 to 61.5% (first generation), from 0.0 to 36.8% (second generation), and from 0.0 to 12.1% (third generation). Importantly, it was found that the parasitism rate was higher in vineyards with ground cover. In addition, EI in the area surrounding the vineyards produced a significant increase in parasitism. These results suggest potential for CBC of L. botrana if EI around vineyards, and ground cover with native perennial plants within vineyards, are encouraged.

From a systematic review framework, we assessed the preclinical evidence on the effectiveness of drug combinations for visceral leishmaniasis (VL) treatment. Research protocol was based on the PRISMA guideline. Research records were identified from Medline, Scopus and Web of Science. Animal models, infection and treatment protocols, parasitological and immunological outcomes were analysed. The SYRCLE's (SYstematic Review Center for Laboratory Animal Experimentation) toll was used to evaluate the risk of bias in all studies reviewed. Fourteen papers using mice, hamster and dogs were identified. Leishmania donovani was frequently used to induce VL, which was treated with 23 drugs in 40 different combinations. Most combinations allowed to reduce the effective dose, cost and time of treatment, in addition to improving the parasitological control of Leishmania spp. The benefits achieved from drug combinations were associated with an increased drug's half-life, direct parasitic toxicity and improved immune defences in infected hosts. Selection, performance and detection bias were the main limitations identified. Current evidence indicates that combination chemotherapy, especially those based on classical drugs (miltefosine, amphotericin B antimony-based compounds) and new drugs (CAL-101, PAM3Cys, tufisin and DB766), develops additive or synergistic interactions, which trigger trypanocidal and immunomodulatory effects associated with reduced parasite load, organ damage and better cure rates in VL.

The nematode Angiostrongylus cantonensis is the most common cause of neuroangiostrongyliasis (manifested as eosinophilic meningitis) in humans. Gastropod molluscs are used as intermediate hosts and rats of various species are definitive hosts of this parasite. In this study, we identified several environmental factors associated with the presence and abundance of terrestrial gastropods in an impoverished urban region in Brazil. We also found that body condition, age and presence of co-infection with other parasite species in urban Rattus norvegicus, as well as environmental factors were associated with the probability and intensity of A. cantonensis infection. The study area was also found to have a moderate prevalence of the nematode in rodents (33% of 168 individuals). Eight species of molluscs (577 individuals) were identified, four of which were positive for A. cantonensis. Our study indicates that the environmental conditions of poor urban areas (presence of running and standing water, sewage, humidity and accumulated rain and accumulation of construction materials) influenced both the distribution and abundance of terrestrial gastropods, as well as infected rats, contributing to the maintenance of the A. cantonensis transmission cycle in the area. Besides neuroangiostrongyliasis, the presence of these hosts may also contribute to susceptibility to other zoonoses.

This article, on the Early Neolithic pottery from the Cabeço da Amoreira shellmidden in the Muge region of central Portugal, presents a detailed review of the evidence to date and a systematic analysis of the decorative and mineralogical characteristics of the stratified and radiocarbon-dated ceramic assemblage. A homogenous pottery manufacturing tradition seems to be present right from the beginning, including both local and non-local ceramics. The authors formulate a working hypothesis on the geographic origin of the exogenous pottery, which contributes to the discussion of the dynamics of mobility and social networks in the Neolithization of south-western Europe.

This study aimed to evaluate the performance of the point-of-care circulating cathodic antigen (POC-CCA) test in a highly endemic area in Brazil, comparing it to the Kato-Katz (KK) technique for sensitivity, specificity and the intensity of the reaction of the test in relation to the parasitic load. The community in Sergipe, Brazil, participated in the study, providing three stool samples, one of urine (POC-CCA) and fingers tick blood sample was tested by enzyme-linked immunosorbent assay (ELISA). Sensitivity, specificity, positive predictive value, negative predictive value, accuracy, kappa coefficient and Spearman's correlation were calculated for the POC-CCA test using the KK as the reference. The prevalence of schistosomiasis by KK testing was 48.82%; POC-CCA (t+) 66.14%; POC-CCA (t−) 45.24%. ELISA results showed 100% agreement in individuals with high and moderate eggs per gram (EPG). POC-CCA presented good diagnostic performance in individuals with medium and high EPG, but there were a high number of false negatives in individuals with low intensity infections. As observed, POC-CCA-filter test improves accuracy and sensitivity compared to a conventional test.

Given an action ${\varphi }$ of inverse semigroup S on a ring A (with domain of ${\varphi }(s)$ denoted by $D_{s^*}$), we show that if the ideals $D_e$, with e an idempotent, are unital, then the skew inverse semigroup ring $A\rtimes S$ can be realized as the convolution algebra of an ample groupoid with coefficients in a sheaf of (unital) rings. Conversely, we show that the convolution algebra of an ample groupoid with coefficients in a sheaf of rings is isomorphic to a skew inverse semigroup ring of this sort. We recover known results in the literature for Steinberg algebras over a field as special cases.

Brannerite (UTi2O6) is among the major uranium-bearing minerals found in ore deposits, however as it has been long considered as a refractory mineral for leaching it is currently disregarded in ore deposits. Brannerite is found in a variety of geological environments with the most common occurrences being hydrothermal and pegmatitic. On the basis of scanning electron microscopy observations coupled with electron probe micro-analyses and laser ablation inductively-coupled plasma mass spectrometer analyses, this study describes the morphological features and the major- and trace-element abundances of brannerite samples from five hydrothermal and five pegmatitic localities across the world. Mineral compositions are also compared with observations from transmission electron microscopy and Raman spectrometry showing that brannerite is amorphous. Significant results include the definition of substitution trends and REE patterns, which are characteristics of either an occurrence or genetic type (hydrothermal and pegmatitic). Hence, in combination, it is possible to obtain reliable constraints for establishing a geochemical classification of brannerite. Inferred fingerprints have direct implications for forensic science and the exploration industry; they also contribute to a better understanding of metallogenic processes and to optimising the extraction of uranium.

Within the next decades, robots will need to be able to execute a large variety of tasks autonomously in a large variety of environments. To relax the resulting programming effort, a knowledge-enabled approach to robot programming can be adopted to organize information in re-usable knowledge pieces. However, for the ease of reuse, there needs to be an agreement on the meaning of terms. A common approach is to represent these terms using ontology languages that conceptualize the respective domain. In this work, we will review projects that use ontologies to support robot autonomy. We will systematically search for projects that fulfill a set of inclusion criteria and compare them with each other with respect to the scope of their ontology, what types of cognitive capabilities are supported by the use of ontologies, and which is their application domain.

Timely access to care services is crucial to support people with dementia and their family carers to live well. Carers of people with dementia (N = 390), recruited from eight countries, completed semi-structured interviews about their experiences of either accessing or not using formal care services over a 12-month period in the Access to Timely Formal Care (Actifcare) study. Participant responses were summarised using content analysis, categorised into clusters and frequencies were calculated. Less than half of the participants (42.3%) reported service use. Of those using services, 72.8 per cent reported timely access and of those not using services 67.2 per cent were satisfied with this situation. However, substantial minorities either reported access at the wrong time (27.2%), or feeling dissatisfied or mixed feelings about not accessing services (32.8%). Reasons for not using services included use not necessary yet, the carer provided support or refusal. Reasons given for using services included changes in the condition of the person with dementia, the service's ability to meet individual needs, not coping or the opportunity to access services arose. Facilitators and barriers to service use included whether participants experienced supportive professionals, the speed of the process, whether the general practitioner was helpful, participant's own proactive attitude and the quality of information received. To achieve timely support, simplified pathways to use of formal care services are needed.

We realize Leavitt ultragraph path algebras as partial skew group rings. Using this realization we characterize artinian ultragraph path algebras and give simplicity criteria for these algebras.

There is no suitable vaccine against human visceral leishmaniasis (VL) and available drugs are toxic and/or present high cost. In this context, diagnostic tools should be improved for clinical management and epidemiological evaluation of disease. However, the variable sensitivity and/or specificity of the used antigens are limitations, showing the necessity to identify new molecules to be tested in a more sensitive and specific serology. In the present study, an immunoproteomics approach was performed in Leishmania infantum promastigotes and amastigotes employing sera samples from VL patients. Aiming to avoid undesired cross-reactivity in the serological assays, sera from Chagas disease patients and healthy subjects living in the endemic region of disease were also used in immunoblottings. The most reactive spots for VL samples were selected, and 29 and 21 proteins were identified in the promastigote and amastigote extracts, respectively. Two of them, endonuclease III and GTP-binding protein, were cloned, expressed, purified and tested in ELISA experiments against a large serological panel, and results showed high sensitivity and specificity values for the diagnosis of disease. In conclusion, the identified proteins could be considered in future studies as candidate antigens for the serodiagnosis of human VL.

The rate of deforestation in the Amazon is increasing. Predictive models estimate that as a result of agricultural expansion 40% of these forests will be lost by 2050. As a consequence the habitat of forest-dwelling species such as the Endangered black-faced black spider monkey Ateles chamek is being lost, particularly along the arc of deforestation in the Brazilian Amazon. We used species distribution modelling to (1) define the distribution of this spider monkey, using environmental predictors, (2) calculate the area of this distribution covered by the protected area network, and (3) calculate the expected loss of the species’ habitat under future scenarios of deforestation. We found that the species occupies only c. 28% of its extent of occurrence. Only 32% of the species’ area of occupancy is legally protected, and the modelling suggests that 31–40% of the species’ habitat will be lost by 2050. We highlight three unprotected regions with extensive forest cover that are predicted to become severely deforested by 2050 as priority regions for expanding the protected area network. We also propose landscape management and restoration in three human-modified regions. Our study provides an example of how species distribution modelling can be applied to assess threats to species and support decision makers in implementing conservation actions.

We define branching systems for finitely aligned higher-rank graphs. From these, we construct concrete representations of higher-rank graph C*-algebras on Hilbert spaces. We prove a generalized Cuntz–Krieger uniqueness theorem for periodic single-vertex 2-graphs. We use this result to give a sufficient condition under which representations of periodic single-vertex 2-graph C*-algebras arising from branching systems are faithful.