We show that for a minimal system
$(X,T)$, the set of saturated points along cubes with respect to its maximal
$\infty $-step pro-nilfactor
$X_\infty $ has a full measure. As an application, it is shown that if a minimal system
$(X,T)$ has no non-trivial
$(k+1)$-tuples with arbitrarily long finite IP-independence sets, then it has only at most k ergodic measures and is an almost
$k'$ to one extension of
$X_\infty $ for some
$k'\leqslant k$. In particular, for
$k=1$, we prove that
$(X,T)$ is uniquely ergodic (even regular with respect to
$X_\infty $), which answers a conjecture stated by Dong et al [Infinite-step nilsystems, independence and complexity. Ergod. Th. & Dynam. Sys. 33(1) (2013), 118–143].