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Petabytes of archival high time resolution observations have been captured with the Murchison Widefield Array. The search for Fast Radio Bursts within these using established software has been limited by its inability to scale on supercomputing infrastructure, necessary to meet the associated computational and memory requirements. Hence, past searches used a coarse integration time, in the scale of seconds, or analysed an insufficient number of hours of observations. This paper introduces BLINK, a novel radio interferometry imaging software for low-frequency FRB searches to be run on modern supercomputers. It is implemented as a suite of software libraries executing all computations on GPU, supporting both AMD and NVIDIA hardware vendors. These libraries are designed to interface with each other and to define the BLINK imaging pipeline as a single executable program. Expensive I/O operations between imaging stages are not necessary because the stages now share the same memory space and data representation. BLINK is the first imaging pipeline implementation able to fully run on GPUs as a single process, further supporting AMD hardware and enabling Australian researchers to take advantage of Pawsey’s Setonix supercomputer. In the millisecond-scale time resolution imaging test case illustrated in this paper, representative of what is required for FRB searches, the BLINK imaging pipeline achieves a 3 687x speedup compared to a traditional MWA imaging pipeline employing WSClean.
We present a 1000 km transect of phase-sensitive radar measurements of ice thickness, basal reflection strength, basal melting and ice-column deformation across the Ross Ice Shelf (RIS). Measurements were gathered at varying intervals in austral summer between 2015 and 2020, connecting the grounding line with the distant ice shelf front. We identified changing basal reflection strengths revealing a variety of basal conditions influenced by ice flow and by ice–ocean interaction at the ice base. Reflection strength is lower across the central RIS, while strong reflections in the near-front and near-grounding line regions correspond with higher basal melt rates, up to 0.47 ± 0.02 m a−1 in the north. Melting from atmospherically warmed surface water extends 150–170 km south of the RIS front. Melt rates up to 0.29 ± 0.03 m a−1 and 0.15 ± 0.03 m a−1 are observed near the grounding lines of the Whillans and Kamb Ice Stream, respectively. Although troublesome to compare directly, our surface-based observations generally agree with the basal melt pattern provided by satellite-based methods but provide a distinctly smoother pattern. Our work delivers a precise measurement of basal melt rates across the RIS, a rare insight that also provides an early 21st-century baseline.
We introduce adaptive particle refinement for compressible smoothed particle hydrodynamics (SPH). SPH calculations have the natural advantage that resolution follows mass, but this is not always optimal. Our implementation allows the user to specify local regions of the simulation that can be more highly resolved. We test our implementation on practical applications including a circumbinary disc, a planet embedded in a disc, and a flyby. By comparing with equivalent globally high-resolution calculations, we show that our method is accurate and fast, with errors in the mass accreted onto sinks of less than 9% and speed ups of 1.07–6.62$\times$ for the examples shown. Our method is adaptable and easily extendable, for example, with multiple refinement regions or derefinement.
Rift propagation, rather than basal melt, drives the destabilization and disintegration of the Thwaites Eastern Ice Shelf. Since 2016, rifts have episodically advanced throughout the central ice-shelf area, with rapid propagation events occurring during austral spring. The ice shelf's speed has increased by ~70% during this period, transitioning from a rate of 1.65 m d−1 in 2019 to 2.85 m d−1 by early 2023 in the central area. The increase in longitudinal strain rates near the grounding zone has led to full-thickness rifts and melange-filled gaps since 2020. A recent sea-ice break out has accelerated retreat at the western calving front, effectively separating the ice shelf from what remained of its northwestern pinning point. Meanwhile, a distributed set of phase-sensitive radar measurements indicates that the basal melting rate is generally small, likely due to a widespread robust ocean stratification beneath the ice–ocean interface that suppresses basal melt despite the presence of substantial oceanic heat at depth. These observations in combination with damage modeling show that, while ocean forcing is responsible for triggering the current West Antarctic ice retreat, the Thwaites Eastern Ice Shelf is experiencing dynamic feedbacks over decadal timescales that are driving ice-shelf disintegration, now independent of basal melt.
The U.S. Department of Agriculture–Agricultural Research Service (USDA-ARS) has been a leader in weed science research covering topics ranging from the development and use of integrated weed management (IWM) tactics to basic mechanistic studies, including biotic resistance of desirable plant communities and herbicide resistance. ARS weed scientists have worked in agricultural and natural ecosystems, including agronomic and horticultural crops, pastures, forests, wild lands, aquatic habitats, wetlands, and riparian areas. Through strong partnerships with academia, state agencies, private industry, and numerous federal programs, ARS weed scientists have made contributions to discoveries in the newest fields of robotics and genetics, as well as the traditional and fundamental subjects of weed–crop competition and physiology and integration of weed control tactics and practices. Weed science at ARS is often overshadowed by other research topics; thus, few are aware of the long history of ARS weed science and its important contributions. This review is the result of a symposium held at the Weed Science Society of America’s 62nd Annual Meeting in 2022 that included 10 separate presentations in a virtual Weed Science Webinar Series. The overarching themes of management tactics (IWM, biological control, and automation), basic mechanisms (competition, invasive plant genetics, and herbicide resistance), and ecosystem impacts (invasive plant spread, climate change, conservation, and restoration) represent core ARS weed science research that is dynamic and efficacious and has been a significant component of the agency’s national and international efforts. This review highlights current studies and future directions that exemplify the science and collaborative relationships both within and outside ARS. Given the constraints of weeds and invasive plants on all aspects of food, feed, and fiber systems, there is an acknowledged need to face new challenges, including agriculture and natural resources sustainability, economic resilience and reliability, and societal health and well-being.
Three years after the beginning of the COVID-19 pandemic, better knowledge on the transmission of respiratory viral infections (RVI) including the contribution of asymptomatic infections encouraged most healthcare centers to implement universal masking. The evolution of the SARS-CoV-2 epidemiology and improved immunization of the population call for the infection and prevention control community to revisit the masking strategy in healthcare. In this narrative review, we consider factors for de-escalating universal masking in healthcare centers, addressing compliance with the mask policy, local epidemiology, the level of protection provided by medical face masks, the consequences of absenteeism and presenteeism, as well as logistics, costs, and ecological impact. Most current national and international guidelines for mask use are based on the level of community transmission of SARS-CoV-2. Actions are now required to refine future recommendations, such as establishing a list of the most relevant RVI to consider, implement reliable local RVI surveillance, and define thresholds for activating masking strategies. Considering the epidemiological context (measured via sentinel networks or wastewater analysis), and, if not available, considering a time period (winter season) may guide to three gradual levels of masking: (i) standard and transmission-based precautions and respiratory etiquette, (ii) systematic face mask wearing when in direct contact with patients, and (iii) universal masking. Cost-effectiveness analysis of the different strategies is warranted in the coming years. Masking is just one element to be considered along with other preventive measures such as staff and patient immunization, and efficient ventilation.
Inaccurate representations of iceberg calving from ice shelves are a large source of uncertainty in mass-loss projections from the Antarctic ice sheet. Here, we address this limitation by implementing and testing a continuum damage-mechanics model in a continental scale ice-sheet model. The damage-mechanics formulation, based on a linear stability analysis and subsequent long-wavelength approximation of crevasses that evolve in a viscous medium, links damage evolution to climate forcing and the large-scale stresses within an ice shelf. We incorporate this model into the BISICLES ice-sheet model and test it by applying it to idealized (1) ice tongues, for which we present analytical solutions and (2) buttressed ice-shelf geometries. Our simulations show that the model reproduces the large disparity in lengths of ice shelves with geometries and melt rates broadly similar to those of four Antarctic ice shelves: Erebus Glacier Tongue (length ~ 13 km), the unembayed portion of Drygalski Ice Tongue (~ 65 km), the Amery Ice Shelf (~ 350 km) and the Ross Ice Shelf (~ 500 km). These results demonstrate that our simple continuum model holds promise for constraining realistic ice-shelf extents in large-scale ice-sheet models in a computationally tractable manner.
Combined approaches are often necessary to address large or invasive skull base pathology. A combined suboccipital craniotomy and neck dissection is often utilized for invasive posterior fossa skull base tumors and neck tumors. Management of these tumors often requires the collaboration of multiple specialties. Tumors in this location are often intimately involved with important neurovascular structures. Good pre-operative evaluation, intra-operative monitoring, and closely monitored post-operative care are essential. The extent of resection and goals of care depends on a case-by-case analysis including the patient’s age, the aggressiveness of the tumor pathology, presenting symptoms, and comorbidities. This chapter reviews the indications, anatomy, and surgical nuances of this complex approach.
Background:Candida auris is an emerging multidrug-resistant pathogen associated with outbreaks in hospitals and skilled nursing facilities (SNFs). Patients with C. auris can have invasive disease or asymptomatic colonization. Because C. auris can be difficult to treat and eradicate in the environment, the CDC recommends using contact precautions and sporicidal agents during patient care. After C. auris was identified in a patient from an LA County SNF (SNF-X), our institution initiated surveillance screening on high-risk patients. Methods: Nurses identified patients residing at SNF-X on admission and contacted infection prevention. These patients were placed on contact or spore precautions. Bilateral axilla and inguinal folds were swabbed with an Eswab and sent for testing by a clinical laboratory-developed RT PCR assay, which can detect C. auris with high sensitivity and specificity with a rapid turnaround time (4–6 hours). This PCR assay was based on a commercial platform IntegratedCycler (Diasorin) and reagents from the same vendor. Environmental swabs from the index patient’s room were sent for PCR by HardyCHROM Candida agar (Hardy Diagnostics) before and after cleaning with OxyCideTM. PCR-positive samples were set up for culture. Results: In total, 27 patients from SNF-X were screened by PCR. Of these patients, 15 (55%) had a tracheostomy present on admission. Moreover, 26 swabs were negative; 1 was positive in the index patient (cycle threshold [Ct] value, 26). Clinical specimens from the index patient’s blood did not grow C. auris; the tracheostomy sample grew predominantly C. albicans which made identification of C. auris challenging by culture. However, investigational testing of this sample by PCR was positive (Ct value, 31). Environmental swabs collected from the patient room were obtained before and after cleaning (Table 1); all environmental cultures were negative at 5 days. Conclusions: Developing hospital-based, high-risk patient screening for C. auris is feasible and may be useful for controlling the spread of C. auris within the community. Further study is needed to determine the usefulness of PCR for environmental testing to assess the risk of nosocomial transmission of C. auris.
Antarctica's ice shelves modulate the grounded ice flow, and weakening of ice shelves due to climate forcing will decrease their ‘buttressing’ effect, causing a response in the grounded ice. While the processes governing ice-shelf weakening are complex, uncertainties in the response of the grounded ice sheet are also difficult to assess. The Antarctic BUttressing Model Intercomparison Project (ABUMIP) compares ice-sheet model responses to decrease in buttressing by investigating the ‘end-member’ scenario of total and sustained loss of ice shelves. Although unrealistic, this scenario enables gauging the sensitivity of an ensemble of 15 ice-sheet models to a total loss of buttressing, hence exhibiting the full potential of marine ice-sheet instability. All models predict that this scenario leads to multi-metre (1–12 m) sea-level rise over 500 years from present day. West Antarctic ice sheet collapse alone leads to a 1.91–5.08 m sea-level rise due to the marine ice-sheet instability. Mass loss rates are a strong function of the sliding/friction law, with plastic laws cause a further destabilization of the Aurora and Wilkes Subglacial Basins, East Antarctica. Improvements to marine ice-sheet models have greatly reduced variability between modelled ice-sheet responses to extreme ice-shelf loss, e.g. compared to the SeaRISE assessments.
We describe an ultra-wide-bandwidth, low-frequency receiver recently installed on the Parkes radio telescope. The receiver system provides continuous frequency coverage from 704 to 4032 MHz. For much of the band (${\sim}60\%$), the system temperature is approximately 22 K and the receiver system remains in a linear regime even in the presence of strong mobile phone transmissions. We discuss the scientific and technical aspects of the new receiver, including its astronomical objectives, as well as the feed, receiver, digitiser, and signal processor design. We describe the pipeline routines that form the archive-ready data products and how those data files can be accessed from the archives. The system performance is quantified, including the system noise and linearity, beam shape, antenna efficiency, polarisation calibration, and timing stability.
We present Phantom, a fast, parallel, modular, and low-memory smoothed particle hydrodynamics and magnetohydrodynamics code developed over the last decade for astrophysical applications in three dimensions. The code has been developed with a focus on stellar, galactic, planetary, and high energy astrophysics, and has already been used widely for studies of accretion discs and turbulence, from the birth of planets to how black holes accrete. Here we describe and test the core algorithms as well as modules for magnetohydrodynamics, self-gravity, sink particles, dust–gas mixtures, H2 chemistry, physical viscosity, external forces including numerous galactic potentials, Lense–Thirring precession, Poynting–Robertson drag, and stochastic turbulent driving. Phantom is hereby made publicly available.
There is strong evidence that people born in winter and in spring have a small increased risk of schizophrenia. As this ‘season of birth’ effect underpins some of the most influential hypotheses concerning potentially modifiable risk exposures, it is important to exclude other possible explanations for the phenomenon.
Methods
Here we sought to determine whether the season of birth effect reflects gene-environment confounding rather than a pathogenic process indexing environmental exposure. We directly measured, in 136 538 participants from the UK Biobank (UKBB), the burdens of common schizophrenia risk alleles and of copy number variants known to increase the risk for the disorder, and tested whether these were correlated with a season of birth.
Results
Neither genetic measure was associated with season or month of birth within the UKBB sample.
Conclusions
As our study was highly powered to detect small effects, we conclude that the season of birth effect in schizophrenia reflects a true pathogenic effect of environmental exposure.
Objectives: Total intracranial volume (TICV) is an important control variable in brain–behavior research, yet its calculation has challenges. Manual TICV (Manual) is labor intensive, and automatic methods vary in reliability. To identify an accurate automatic approach we assessed the reliability of two FreeSurfer TICV metrics (eTIV and Brainmask) relative to manual TICV. We then assessed how these metrics alter associations between left entorhinal cortex (ERC) volume and story retention. Methods: Forty individuals with Parkinson’s disease (PD) and 40 non-PD peers completed a brain MRI and memory testing. Manual metrics were compared to FreeSurfer’s Brainmask (a skull strip mask with total volume of gray, white, and most cerebrospinal fluid) and eTIV (calculated using the transformation matrix into Talairach space). Volumes were compared with two-way interclass correlations and dice similarity indices. Associations between ERC volume and Wechsler Memory Scale-Third Edition Logical Memory retention were examined with and without correction using each TICV method. Results: Brainmask volumes were larger and eTIV volumes smaller than Manual. Both automated metrics correlated highly with Manual. All TICV metrics explained additional variance in the ERC-Memory relationship, although none were significant. Brainmask explained slightly more variance than other methods. Conclusions: Our findings suggest Brainmask is more reliable than eTIV for TICV correction in brain-behavioral research. (JINS, 2018, 24, 206–211)
Field experiments were conducted to determine the effect of different rates and application times of MON 37500 on downy brome control in winter wheat and on rotational crop injury. In southeastern Washington, MON 37500 applied postemergence at 36 to 72 g ai/ha in the fall and spring controlled downy brome 90 to 97% and 45 to 71%, respectively. MON 37500 was applied postemergence to winter wheat at 18, 36, and 72 g/ha during fall 1995 and spring 1996 near Moscow, ID; Pendleton, OR; and Endicott, WA, to determine its effect on rotational crops planted during spring 1997. At Pendleton, OR, fall applications of MON 37500 at 18, 36, and 72 g/ha applied to actively growing wheat reduced seed yield of spring barley and pea 13 to 59% and 26 to 29%, respectively, when these crops followed winter wheat in the rotation. At this site, spring applications of 36 and 72 g/ha reduced seed yield of spring barley 17 to 34%; when applied in the fall or spring, MON 37500 reduced canola yield 31 to 73%. MON 37500 at 18 g/ha in the spring reduced pea biomass 32% at Endicott. Aboveground biomass and seed yield of barley, pea, lentil, and mustard at Moscow were not affected by MON 37500 carryover. However, using a grain sorghum bioassay, predicted final concentrations of MON 37500 in soil at all three locations 360 d after treatment (DAT) was similar, ranging from 0.5 to 2 ng ai/g. In growth chamber herbicide dose–response studies, grain sorghum shoot height was reduced more at lower doses (0.025 to 5 ng/g) of MON 37500 in Pendleton soil than in soils from the other field locations. Perhaps the greater rotational crop injury observed at the Pendleton location was partly related to greater soil activity of the herbicide.
I was going to have said that Hegel was blunt, but his reputation precedes him, no doubt, and such an obvious lie would have cast suspicion on the rest of my contribution. Let me say, instead, that he has the virtue of being certain of his interpretation of the history of philosophy, certain of how each part fits into the framework he provides, and certain that providing a framework is the task of philosophy as such. And if even Hegel can be forgiven for any particular misreading, the more troubling betrayal lies in the certainty that philosophy is defined and framed through the articulation of claims – through situating the agency of language in the action of contestation oriented by the progress of science. This framing is the most difficult for academics to avoid, for the technologies of argument (whether consciously Hegelian or not) dominate teaching and publishing throughout the modern academy. That this technology is at stake, and that merely arguing for a more humanistic technology or more open stance toward unconventional claims will not solve the problem, is the difficulty and contribution I seek to draw out of Plato's Protagoras.
At the broadest level, the Hegelian frame is the embodied structure of subjective grasping or comprehension, and Socrates, Plato, and Aristotle are seen as the great precursors to Hegel's insight. Hegel is not accusing the Athenian philosophers of believing that humans possess rationality, or use some sort of rationality as a tool; in fact, his continuing attraction for continental philosophers rests in the idea that participation in the activity of the world constitutes a developing language, unbound by a priori rules of reason or reified ideas of subjectivity. The Athenian trio, Hegel tells us, were the first to turn to the authority of a moral claim in a subject's apprehensions (Socrates’ emphasis on the task of philosophy), of the conceptions themselves (Plato's ideas), and then finally of the process of perfecting those conceptions in a self-conscious appropriation of the reality of one's situation (Aristotle's ἐνέργϵια as ontological foundation grasped in ἐντϵƛϵχϵία).