Weed seeds are potential contaminants of composts derived from biowastes. We assessed the effect of steam treatment alone and in combination with composting on the mortality of barnyardgrass [Echinochloa crus-galli (L.) P. Beauv.] seeds in a biowaste substrate consisting of a mixture of onion (Allium spp.) waste (60%), horse (Equus spp.) manure (20%), and wood shavings (20%). In the first study, seeds of six populations of E. crus-galli exposed to temperatures ranging from ca. 60 to 99 C followed by a 3-min residence time exhibited a decline in seed germination from approximately 25% to 0%. The E. crus-galli populations varied greatly in germinability and responded differently to high temperatures. Samples with lower germinability as assessed in controls were killed at lower temperatures than samples with higher initial germinability. However, to ensure an almost 100% kill of all seeds in the populations, a mean temperature of 100 C was necessary. In another study, seed germination was assessed after steaming the biowaste mixture to a mean temperature of about 60 C and subsequently composting. A short steaming period of the biowaste mixture at approximately 60 C before composting was unnecessary, as all composted seed samples, including the non-steamed control seeds, died during the composting process.

The transition from conventional cage systems to cage-free egg production in China remains limited despite apparently increasing consumer demand for cage-free eggs. This study interviewed 15 large-scale Chinese egg producers using cages and/or cage-free systems (i.e. single-, multi-tier and free-range) to investigate the perceived challenges and opportunities during the transition. The cage farms’ scales range from 110,000 to 30 million, while the cage-free farms keep between 12,000 and 300,000 laying hens. Drawing upon the COM-B model of the Behaviour Change Wheel, this study explored how producers’ Capabilities, Opportunities, and Motivations impact decision-making processes. Key findings reveal that cage and cage-free producers considered consumer demand and profitability as primary drivers for adopting cage-free systems. While free-range producers were more confident in the market, barn system producers faced greater uncertainty due to limited engagement from corporate buyers. Moreover, these cage-free producers believed reliable certification and labelling schemes to be critical for building consumer trust and ensuring the success of cage-free operations. All the participants perceived access to sufficient land and financial resources to be essential for a successful transition. While most studies propose education as a long-term strategy to promote the growth of the cage-free egg sector, our findings are the first to highlight that engaging corporate buyers and establishing trustworthy certification schemes are the most crucial short-term interventions required to drive the development of large-scale cage-free farms and support sustained improvements in animal welfare in China.

Five species of monorchiids are known from fishes of the family Gerreidae, of which one is from Australian waters. Here, we report it and two new monorchiids from three species of Gerres Quoy & Gaimard, 1824 from off Lizard Island, northern Great Barrier Reef, and Moreton Bay in south-eastern Queensland: Gerres oyena (Forsskål), Gerres oblongus Cuvier and Gerres subfasciatus Cuvier. One of the new species, found only in G. oblongus at Lizard Island, conforms most closely to the concept of Proctotrema Odhner, 1911. However, it differs from species of Proctotrema in oral sucker shape and location of intestinal bifurcation and termination. It is phylogenetically distinct from two sequenced species of Proctotrema; thus, we propose Obscuromonorchis ranae n. g., n. sp. The second new species infects all three gerreids, occurs at both Lizard Island and Moreton Bay, and is morphologically most similar to the concept of Monorchicestrahelmins Yamaguti, 1971. However, the combination of the length of the caeca, size of the testis and post-testicular region, and the form of spination in the genital atrium presents a clear genus-level distinction that warrants proposal of a new genus. There are no molecular data for the three recognised species of Monorchicestrahelmins. We propose Argenticola shuyinae n. g., n. sp. for this species. New specimens of Gerricola queenslandensis Wee, Cutmore & Cribb, 2021 were collected from off Lizard Island and Moreton Bay. The three species form a well-supported clade but with internal branch lengths and topology consistent with genus-level differentiation.

Coral reefs have been rapidly deteriorating, worldwide, due to global warming, ocean acidification, bleaching, diseases, and various local anthropogenic stressors, such as coastal development, habitat destruction, overfishing and eutrophication, all of which have significantly impacted the metabolic functions of corals and other marine organisms. Global warming has been identified as the main culprit in the decline of coral reefs. In response, we assessed the metabolic responses of one of the most iconic Caribbean corals to elevated temperatures. Accordingly, the proteomic profile of Acropora palmata was investigated during the cool dry and hot wet seasons of 2014 and 2015 in Puerto Rico using a combination of two-dimensional gel electrophoresis (2D-GE) and mass spectrometry. The study revealed that the average number of differentially abundant proteoforms between seasons was 527 in the inner-shelf reef at Enrique and 1,115 in the mid-shelf reef at San Cristobal, both located on the insular shelf of southwestern Puerto Rico. Our results show significant changes in A. palmata’s proteome, inducing alterations in key metabolic, enzymatic, translational, and apoptotic processes, between the cool dry and hot wet seasons. Quantitative real-time reverse transcription PCR (qRT-PCR) was used to validate the variation in the expression of five candidate stress-related genes under different seasonal temperatures. The findings highlight key proteoforms whose abundance varied with temperature, offering insight into A. palmata’s metabolic capacity to acclimate and respond to seasonal temperature fluctuations.

Previous studies on the association between fruit juice consumption and type 2 diabetes remain controversial, which might be due to heterogeneity in the polygenic risk score (PRS) for type 2 diabetes. We examined the association between fruit juice and type 2 diabetes by PRS for type 2 diabetes. We investigated whether fruit juice influences type 2 diabetes risk differently among individuals with varying genetic risks. Data from the Japan Multi-Institutional Collaborative Cohort (J-MICC) study, a cross-sectional study of 13 769 Japanese individuals was used for our analysis. The primary exposure was the frequency of fruit juice, categorised as do not drink, less than 1 cup per day or more than 1 cup per day. We selected PGS002379, a PRS for type 2 diabetes developed using East Asian populations. The primary outcome was physician-diagnosed type 2 diabetes, reported by participants. The consumption of fruit juice was significantly inversely associated with type 2 diabetes in the group with a high PRS for type 2 diabetes (OR: 0·78, 95 % CI: 0·65, 0·93 for < 1 cup/d and OR: 0·54, 95 % CI: 0·30, 0·96 for > 1/d), but this association was not observed in the low PRS group. Fruit juice consumption was inversely associated with type 2 diabetes, especially in genetically high-risk populations for type 2 diabetes.

Antarctica, which has always been of great interest to researchers worldwide, is currently attracting considerable attention owing to climate change and other topics. In this context, bibliometric analysis allows the identification of hot topics, scientific productivity, cooperation, research gaps and strategic areas of potential interest. We conducted a bibliometric study to evaluate the global production of Antarctic research between 1980 and 2023 and analysed Spanish National Antarctic Programme (NAP) production as a case study. Scientific publications were reviewed and classified based on their main themes, key word co-occurrence and international collaborations. We found that scientific production worldwide and in the Spanish NAP has progressively increased since 1980. Globally, the main areas of research are the geosciences, oceanography and atmospheric sciences. However, the Spanish NAP, which reported 2287 publications, has focused more on the geosciences and ecology. Spanish Antarctic researchers have mainly collaborated with researchers from the USA, the UK, Germany and Italy. Our research highlights the importance of strengthening research plans to diversify and facilitate international collaboration, promoting a more interdisciplinary approach to address the current and future challenges identified by the scientific community. In this context, specific opportunities for developing a Spanish NAP strategic plan are discussed.

The question of whether PCR is reliable sounds strange at first. However, looking at the scientific literature from the 1950s and 60s, one will find many publications on the physicochemistry of DNA that have been forgotten meanwhile. Quite a few of these studies have shown that DNA is thermolabile, which consequently raises the question of whether this thermolability is relevant in the context of PCR, namely in the denaturation phase. However, it can be shown that this is not the case: losses due to thermal hydrolysis are irrelevant for the performance of contemporary PCR protocols and their specificity as well as for the significance of their results. There is now a huge amount of scientifically verified and published data on technical and molecular aspects of PCR, a small selection of which we quote here. In addition, we present some primary data that also clearly demonstrate the reliability of PCR.

From December 2023 to November 2024, regular surveys were conducted to document finfish bycatch in the trawl fishery landing at Veraval Fishing Harbour, northeastern coast of the Arabian Sea. As an outcome of this exploration, three male specimens of Callionymus gardineri and five (four males and one female) specimens of C. omanensis were collected. Both species were recorded for the first time from the north-western Arabian Sea, coastal waters of India, accompanied by a new maximum length record for C. omanensis (Lmax = 122.1 mm standard length). Callionymus omanensis was originally described based on a single male specimen, whereas the description of female C. omanensis was interpreted. While the exact justification for their distribution in this new locality remains unknown, both dragonet species likely moved eastwards from their native habitats along the western Arabian Sea coast. This strongly suggests a significant research gap in our understanding of low-value deep-sea trawl bycatch, necessitating further exploration to improve biodiversity assessments. Herein, the detailed meristic counts and morphometric measurements are compared, and updated distributional information is collated.

Data on the infection of Middendorffʼs eelpout, Hadropareia middendorffii, by metacercariae of the trematodes Cryptocotyle lingua Creplin, 1825 and Liliatrema skrjabini Gubanov, 1953, which are causative agents of black spot disease, is provided here for the first time for Taui Bay, Sea of Okhotsk. The prevalence of infection of fish by larvae of C. lingua reached 79%, while the intensity of infection varied from one to 278 individuals (with an average of 53). The prevalence of infection by L. skrjabini was lower (40%), with an intensity from one to 22 larvae (on average, eight). Metacercariae of both trematode species were surrounded by two envelopes: an outer, connective tissue capsule formed by the host’s cells, and an inner cyst formed by the parasite. The examined metacercariae were found in all regions of the fish’s body (head, trunk, and fins), with approximately equal numbers of individuals of both species found in tissues of the head and trunk regions. Metacercariae of C. lingua were localised in the fishes’ muscles, not only immediately under the skin but also in deeper layers. The capsules formed around metacercariae of both trematode species were dominated by fibroblasts and collagen fibres and did not show pronounced signs of inflammation. Studying the distribution of black spot disease and its effects on fish is crucial for understanding disease patterns in relation to fish population dynamics. It may also inform the development of effective anthelmintic treatments for use in aquaculture farms.

Depression, a leading cause of global disability, arises from a multifaceted combination of genetic and environmental components. This study explores the relationship between major depressive disorder (MDD) polygenic scores (PGS), characteristics and symptoms of depression, and community-shared socioeconomic factors derived from postal code data in a cohort of 12,646 individuals from the Australian Genetics of Depression Study (AGDS). Our findings reveal that people living in areas with relatively higher socioeconomic advantages and education/occupation scores are more likely to report experiencing fewer depressive symptoms during their worst depressive period, as well as fewer number of lifetime episodes. Additionally, participants who reported depression onset later in life tend to currently reside in wealthier areas. Interestingly, no significant interaction between genetic and socioeconomic factors was observed, suggesting their independent contribution to depression outcomes. This research underscores the importance of integrating socioeconomic factors into psychiatric evaluation and care, and points to the critical role of public policy in addressing mental health disparities driven by socioeconomic factors. Future research should aim to further elucidate the causal relationships within these associations and explore the potential for integrated genetic and socioeconomic approaches in mental health interventions.

This study examines how human activities influenced soil development at two contrasting Arctic sites: Maiva, a 19th-century farmstead, and Snuvrejohka, a seasonal Sámi reindeer herding settlement in the Lake Torneträsk region, northern Sweden. Using geochemical and geophysical soil analyses, we explore the spatial distribution and vertical development of anthropogenic signals in the soil. At Maiva, prolonged agricultural use and earthworm bioturbation have led to extensive soil mixing and altered soil horizons, resulting in elevated phosphate, lead, and organic matter concentrations in Ap and Ah horizons. In contrast, Snuvrejohka displays more stratified profiles with localized chemical enrichment around hearths, primarily within E horizons. These results highlight how different land-use practices leave distinct geochemical fingerprints in Arctic soils and emphasize the need for sampling strategies adapted to site-specific soil formation processes. Our findings demonstrate that even short-term or seasonal human activities can leave distinct and detectable signatures in Arctic soils. Through an integrated approach combining soil science, geoarchaeological methods, and historical data, this study provides new insights into the reconstruction of past land-use practices and highlights the vulnerability of archaeological soil records in Arctic environments facing rapid climate-driven change.

Potato (Solanum tuberosum L.) is crucial for food security in Rwanda, but its production growth has slowed. Improved potato varieties are urgently needed for Rwanda potato farmers. Crop breeding can effectively support smallholder farmers when it aligns with their environmental conditions and preferences. Additionally, integrating citizen science into variety development can enhance variety adoption and suitability for smallholder farmers. We assessed the insights from a crop trial following a triadic comparison of technology options (tricot) approach, linking the results with environmental, socio-economic, and on-station trial data. Under a tricot trial, 460 farmers tested eleven potato varieties, randomly allocated in incomplete blocks of three, allowing each farmer to test and compare three varieties. Biological data, reflecting breeding and variety genotypic values, were generated from multi-environmental tests conducted during 2018–2019 to evaluate the adaptability of new varieties. This research revealed that Rwandan farmers preferred the pre-1990 varieties (Cruza and Kirundo), while Gisubizo and Kazeneza, post-2018 varieties, were also considered competitive. Farmers’ preferences were influenced by diverse environmental and socio-economic conditions, with taste being crucial for home consumption and yield prioritized for market sales. Additionally, seasonal temperatures influenced the yield performance ranking of potato varieties across regions, while economic considerations and gender dynamics shaped different patterns of variety preferences. Despite challenges in aligning on-station and on-farm data, our integrated approach provides actionable insights for breeding programmes to develop potato varieties that better align with farmers’ needs, as well as environmental and socio-economic conditions. This innovative method can enhance breeding efficiency, variety adoption, and potato productivity, contributing to food security and agricultural sustainability.

There has been substantial research undertaken on the role of a health-promoting diet in depression. Yet, the evidence of the relationship between the Nordic diet and the risk of depression is scarce. This cross-sectional study aimed to assess whether a healthy Nordic diet is associated with depressive symptoms. In total, 2603 men aged 42–60 years from the Kuopio Ischaemic Heart Disease Risk Factor Study were included. Diet quality was evaluated with a healthy Nordic diet score derived from the 4-day food diaries and depressive symptoms with the self-reported Human Population Laboratory (HPL) depression scale. Quade ANCOVA was used to examine the mean values of HPL scores in quartiles of a healthy Nordic diet score. Participants’ mean age was 53 years and BMI 26·8 kg/m2; 31·7 % were current smokers, and 86·9 % were married or living as a couple. The mean healthy Nordic diet score was 12·8 (sd 4·0, range 2–25), and the mean HPL depression score was 1·9 (sd 2·1, range 0–13). The findings suggested that lower adherence to a healthy Nordic diet was associated with higher HPL depression scores after adjusting for age, examination year, daily energy intake, leisure-time physical activity, adulthood socio-economic status, smoking and marital status (extreme quartile difference: 0·33 points, 95 % CI 0·10, 0·56, P for trend across the quartiles = 0·003). The results support the hypothesis that a lower-quality diet increases the odds of having depressive symptoms. However, prospective studies are needed to confirm the association.

Understanding the interplay between adiposity and histopathological features of colorectal tumours is crucial for advancing strategies in disease management. We conducted a retrospective cohort study over an 8-year period (2007–2015), including patients who underwent surgical resection for colorectal cancer (CRC). Body composition was assessed via computed tomography (CT) at the level of the third lumbar vertebra, with visceral adipose tissue (VATd) and subcutaneous adipose tissue (SATd) radiodensities stratified into tertiles. Systemic inflammatory status was evaluated using the neutrophil-to-lymphocyte ratio (NLR). Logistic regression was employed to analyse the relationship between variables, using OR with 95 % CI. The Cox proportional hazards model assessed hazard ratios (HR) with 95 % CI. A total of 231 patients were included (48·9 % men, 51·1 % women), with 93·6 % in CRC stages II and III. Multivariate analyses demonstrated that CRC stages II and III (OR = 5·15, 95 % CI: 1·60, 16·62; OR = 5·16, 95 % CI: 1·59, 16·77) and low VATd (1st and 2nd tertiles; OR = 2·43, 95 % CI: 1·30, 4·53) were associated with the presence of desmoplasia. In the multivariate Cox analyses, only stage III disease (HR = 4·77, 95 % CI: 1·09, 20·89) and moderate to accentuated fibrous stroma (HR = 1·90, 95 % CI: 1·03, 3·46) were identified as predictors of reduced overall survival. These findings suggest that increased visceral adiposity may contribute to the development of a desmoplastic tumour microenvironment. Moreover, the presence of moderate to accentuated fibrous stroma is significantly associated with poorer long-term survival in patients with CRC.

Breeding management in laboratory rodents is challenging, particularly around parturition and the neonatal period, where cage disturbance is often avoided in an attempt to limit neonatal mortality. Nevertheless, cage-side observations and single daily checks frequently underestimate pup numbers born and miss parturition complications. Home Cage Monitoring (HCM) systems are gaining popularity in animal facilities, detecting critical events such as food availability and activity levels. Parturition is a complex event involving specific patterns of behaviour, activity and vocalisations. In this study, audio and video data were collected from parturition events of single-housed C57BL/6J females and breeding pairs housed in a prototype rack with integrated microphones. Vocalisations were detected during parturition in both housing conditions, with minimal vocalisations observed prior to parturition, except for ultrasonic sounds in pair-housed mice (Mus musculus). After parturition, all vocalisations gradually decreased. Despite limitations such as the need for post-event analysis and the focus on a single mouse strain, this study suggests that detecting vocalisations can be a promising basis for developing automated parturition detection. This highlights the potential of HCM systems for improving breeding management and welfare in laboratory rodent colonies.

In this study, the effects of wheat-based diets processed in a hammer mill with different sieve diameters (4000 (fine), 5000 (medium) and 6000 (coarse) µm) and enzyme addition (0 and 300 g/ton) on the performance, slaughtering characteristics, tibia properties, jejunum morphology and pancreatic enzyme secretion in broilers (1–42 days) were tested in a 3×2 factorial design. A total of 480 one-day-old chickens were randomly distributed into 6 treatment groups of 5 replicates, each containing 16 birds. The performance of broilers was not affected by particle size. Dietary enzyme supplementation improved body weight on the 1–10th day period but did not affect other performance parameters. Thigh and abdominal fat increased with fine particle size, breast weight increased with medium particle size and gizzard weight increased with coarse particle size. Enzyme addition decreased the carcass and gizzard weights. Tibia breaking strength decreased with fine particle size. Tibia wall thickness and ash increased with enzyme addition. Pancreatic enzyme secretions increased in the coarse group and with enzyme supplementation. Jejunum histomorphology worsened with coarse particle size, while enzyme inclusion improved histomorphology. The interactions affected feed consumption (25–42nd day), feed conversion ratio (11–24th day), breast weight, tibia breaking strength and ash, pancreas weight, lipase activity and villus parameters. These findings demonstrated that coarse grinding of wheat-based diets improved bone development and pancreatic enzyme activity without affecting performance while worsening jejunum morphology. Enzyme addition positively affected bone and digestive system development.

This study aimed to compare the clinical outcomes of using refrigerated versus pre-warmed media for preparing time-lapse dishes in in vitro fertilization (IVF). Patients undergoing their first IVF/ICSI cycle were divided into two groups. The control group used pre-warmed culture media, while the experimental group used refrigerated culture media. The osmotic pressure of the culture droplets in both groups was tested. No statistical differences were found between the two groups’ basic data. The proportion of air microbubbles affecting imaging significantly decreased (4.55% vs. 37.97%, P < 0.001) when using pre-warmed media. However, the blastocyst formation rate (56.62% vs. 49.70%, P = 0.046) and total high-quality embryo rate (22.26% vs. 17.06%, P = 0.047) were significantly higher in the refrigerated media group compared to the pre-warmed media group. The higher rate of high-quality embryos in the refrigerated media group might result in a higher single embryo transfer rate (45.10% vs. 18.52%, P = 0.020) and implantation rate (58.23% vs. 34.69%, P = 0.010). From day –1 to day 1, osmolality increased, with the P-3.5 group showing a significant elevation compared to the other three groups. After 5 days of incubation, the osmotic pressure of group R-4.0 was significantly lower than that of groups P-3.5, P-4.0 and P-3.5. In conclusion, refrigerated culture media dishes helped stabilize the osmotic pressure of the culture microenvironment and reduce water evaporation. The refrigerated group showed a higher rate of high-quality embryos and live births, although pre-warmed culture media effectively reduced the occurrence of air microbubbles that affect embryo imaging in the next day’s dishes.