Salt solutions have complex effects on the swelling characteristics of compacted bentonite; these effects are caused by the inhibitory action of salinity and the ion-exchange reaction between the solution and bentonite. In order to characterize the swelling properties of compacted bentonite in a salt solution, swelling deformation tests were carried out for Gao-Miao-Zi (GMZ) bentonite specimens in NaCl and CaCl2 solutions. Swelling characteristics decreased with increasing salt concentration. Swelling strains in NaCl solution were larger than those in CaCl2 solution, even though the ionic concentration of 1.0 mol/L (M) NaCl solution is larger than that of 0.5 M CaCl2. According to the exchangeable cations tests, cation exchange was different for specimens immersed in different salt solutions. The swelling fractal model was used to predict the swelling strains of compacted bentonite in a concentrated salt solution. In this model, the effective stress incorporating osmotic suction was applied to take the effect of salinity into consideration, and the swelling coefficient, K, was employed to describe the swelling properties affected by the variation in exchangeable cations. In the model, fractal dimension was measured by nitrogen adsorption, and the salt solution had little effect on fractal dimension. K was estimated by the diffuse double layer (DDL) model for osmotic swelling in distilled water. Comparison of fractal model estimations with experimental data demonstrated that the new model performed well in predicting swelling characteristics affected by a salt solution.

The adsorption and photolysis of the herbicide bensulfuron-methyl [2-(4, 6-dimethoxypyrimidm-2-carbamoylsulfamoyl)-o-toluic acid methyl ester] on homoionic Na+-, Ca2+- and Fe3+-montmorillonite and kaolinite clays were studied. The Freundlich adsorption coefficient, Kf, measured from isotherms on clays followed the order Na+ < Ca2+ < Fe3+. Montmorillonite showed a greater adsorptive capacity than kaolinite. Analysis of Fourier transform infrared spectra of bensulfuron-methyl adsorbed on clay suggested probable bonding interactions between bensulfuron-methyl and homoionic clays. The photolysis rate of herbicide adsorbed on homoionic clay surfaces was quite slow to its free state and decreased in the order Na+ > Ca2+ > Fe3+, indicating that adsorption may have prevented photolysis.

This work presents Atomistic Topology Operations in MATLAB (atom), an open source library of modular MATLAB routines which comprise a general and flexible framework for manipulation of atomistic systems. The purpose of the atom library is simply to facilitate common operations performed for construction, manipulation, or structural analysis. Due to the data structure used, atoms and molecules can be operated upon based on different chemical names or attributes, such as atom- or molecule-ID, name, residue name, charge, positions, etc. Furthermore, the Bond Valence Method and a neighbor-distance analysis can be performed to assign many chemical properties of inorganic molecules. Apart from reading and writing common coordinate files (.pdb, .xyz, .gro, .cif) and trajectories (.dcd, .trr, .xtc; binary formats are parsed via third-party packages), the atom library can also be used to generate topology files with bonding and angle information taking the periodic boundary conditions into account, and supports basic Gromacs, NAMD, LAMMPS, and RASPA2 topology file formats. Focusing on clay-mineral systems, the library supports CLAYFF (Cygan, 2004) but can also generate topology files for the INTERFACE forcefield (Heinz, 2005, 2013) for Gromacs and NAMD.

Fired bricks were valued as essential building materials in the central tradition of Byzantine architecture in Constantinople (İstanbul), Anatolia, and the Balkans. In this study, Byzantine bricks from three construction periods, covering nearly nine centuries (fifth–fourteenth centuries), of Anaia Church (Kadıkalesi) in Western Anatolia were investigated to determine their characteristics, raw material properties, and production technologies. The characteristics of the bricks were evaluated and compared in order to identify similarities and differences between the periods and to investigate the continuity of the tradition of brick production over centuries. Basic physical and colorimetric properties, chemical and mineralogical compositions, thermal behavior, and microstructural and mechanical properties of bricks were determined by scanning electron microscopy (SEM) coupled with energy dispersive spectroscopy (SEM–EDS), Fourier-transform infrared spectrometry (FTIR), X-ray diffraction (XRD), thermogravimetric analysis (TGA), and mechanical tests. The results indicated that all the bricks in the Anaia Church were brown-beige colored, highly porous, low-density materials with low mechanical strength. They were produced from Ca-rich clays, probably obtained from two different sources used during all construction periods. The mineralogical composition and thermal properties revealed that the bricks from the first and second periods were fired at between 800 and 900°C and the bricks from the third period were fired at < 850°C. Greater calcium content and firing temperatures were found to reduce the total porosity and the number of small pores (< 10 μm) and increase the mechanical strength of the bricks. The results of the study revealed no significant differences in the production of bricks, including raw material sources and kiln conditions, for the different construction periods of the church.

Because inorganic nanosheets, such as clay minerals, are anisotropic, the manipulation of nanosheet orientation is an important challenge in order to realize future functional materials. In the present study, a novel methodology for nanosheet manipulation using laser radiation pressure is proposed. When a linearly polarized laser beam was used to irradiate a niobate (Nb6O174-) nanosheet colloid, the nanosheet was trapped at the focal point so that the in-plane direction of the nanosheet was oriented parallel to the propagation direction of the incident laser beam so as to minimize the scattering force. In addition, the trapped nanosheet was aligned along the polarization direction of the linearly polarized laser beam.

Electrical conductivity is an important soil property related to salinity, and is often used for delineating other soil properties. The purpose of this study was to examine the influence of smectite properties on the complex electrical conductivity spectra of hydrated smectitic clays. Four smectites were saturated with Ca, Mg, Na or K and equilibrated at four relative humidities ranging from 56 to 99%. X-ray diffraction was used to determine fractions of the various smectite layer hydrates (0 to 4 layers of interlayer water molecules) in each sample. A vector network analyzer was used to determine the real component of the complex electrical conductivity spectra (σ′) for frequencies (f) ranging from 300 kHz to 3 GHz. Values of the dc electrical conductivity(σ0), the frequency where the slope changes in the spectra (fr), and the slope at the high-frequency end of the spectra (n) were determined by fitting σ′ to σ′(f) = σ0(1 + f/fr)n. Both σ0 and fr increased with the total amount of water, the amount of interlayer water, and, for saturating cations in the order K < Mg < Ca < Na. The opposite trends were observed for n. The values of these parameters were influenced by the type of smectite, but the trends were not consistent for the effect of layer charge. The results indicate that interlayer water in smectites contributes to the electrical conductivity of hydrated smectites, and that polarization of water by local electrical fields has a substantial influence on the complex electrical conductivity spectra of smectites. The accuracy of salinity estimates for soils and sediments that are based on conductivity measurements maybe adversely affected unless the effects of hydrated clays on electrical conductivity are considered.

Halloysite nanotubes (HNTs) have attracted much attention as delivery carriers for various drugs, but the loading of one such drug, quercetin, on HNTs has been investigated only rarely and usually involved cyclic vacuum pumping. The main objective of the present study was to develop a novel carrier system based on HNTs for quercetin delivery without a vacuum process and to investigate the effect of chemical modification of HNTs on the loading and release of quercetin. For this purpose, comparative studies of five chemical modification reagents (sodium lauroamphoacetate, cocoamidopropyl betaine, 1-hydroxyethyl 2-nonyl imidazoline betaine, triethanolamine, and dipicolinic acid) functionalized on HNTs were investigated for quercetin loading and in vitro release. Characterization of raw halloysite, modified halloysite, and quercetin-loaded halloysite were done by X-ray diffraction (XRD), Fourier-transform infrared spectrometry (FTIR), thermogravimetric analysis (TGA), and transmission electron microscopy (TEM). The results indicated that chemical modification could improve the interactions between HNTs and quercetin. After chemical modification, quercetin was anchored to both the inner and outer surfaces of HNTs by electrostatic attraction, hydrogen bonding, and van der Waals forces. Sodium lauroamphoacetate-modified HNTs were given the highest loading of 1.96 wt.% among the five reagents. Cocamidopropyl betaine-modified HNTs exhibited the best sustained-release profile with only 29.07% for initial burst release and 480 h of consecutive release. Carboxyl groups of the modification reagent improved the loading capacity of quercetin. Amide groups prolonged drug release due to the strong affinity between amine and phenolic hydroxyl groups of quercetin. The release of quercetin from the cocamidopropyl betaine-modified HNTs fitted a first-order kinetics model well. The present study suggested that cocamidopropyl betaine-modified HNTs offer promise as vehicles for delivery of quercetin and for extending the application of quercetin.

The origins of dolocrete and associated palygorskite in the Çanakkale region of Turkey have been little studied, but are of fundamental importance for a more complete understanding of the mineralogy of this region. The present study was undertaken in order to narrow this gap. Siliciclastic red mudstones within alluvial-fan deposits of the Middle Miocene Sariyer Formation locally contain dolocretes in various forms (powdery, nodular, and fracture-filling) and scarce matte-brown, authigenic clay lenses. The mineralogical characteristics of dolocrete and authigenic clay lenses were examined using polarized-light microscopy, X-ray diffraction, differential thermal analysis and thermal gravimetry, scanning-electron microscopy, and infrared spectroscopy, as well as by chemical and isotopic methods. These analyses indicate that the dolocretes are indeed predominantly dolomite, coexisting with variable amounts of palygorskite. The authigenic clay lenses are composed mainly of palygorskite. Dolomite appears as euhedral crystals, whereas palygorskite developed authigenically as interwoven fibers on and between resorbed dolomite crystals, rimming euhedral crystals, and as fiber bundles (where dolomite ± magnesite is absent). The stable-isotope values and some petrographic features, such as alveolar texture and dolomite needles, support a pedogenic origin for the dolocretes. In the initial stage, dolomite formed by replacement of siliciclastic red mudstones and/or by precipitation from percolating soil-derived water in a near-surface setting. Subsequently, palygorskite either precipitated on the dolomite crystals from relatively more evaporative water, replaced the host-rock mudstone in the presence of Al + Fe, or formed directly from solution where the Ca/Mg ratio decreased and the Al + Fe increased. In view of the large Cr and Ni contents of the bulk-rock samples, the elements required for the crystallization of dolomite and palygorskite (namely Mg, Ca, Si, Al, and Fe) may have been supplied by weathering of ophiolitic rocks that crop out in the area.

Mineralogical and thermal characteristics of synthetic Al-, Cr-, Mn-, Ni- and Ti-bearing goethites, synthesized via alkaline hydrolysis of metal-ferrihydrite gels, were investigated by powder X-ray diffraction and differential thermal analysis. Shifts in unit-cell dimensions were consistent with size of substituent metal ions and confirmed the incorporation of Al3+, Cr3+, Mn3+, Ni2+ and Ti4+ in the goethite structure. A weight loss of 6.2 wt.% for goethite containing 12.2 mol.% Ti, being significantly less than for stoichiometric goethite, is consistent with the replacement of Fe by Ti in the goethite structure coupled with the substitution of O2− ions for OH− (i.e. proton loss). These data provide the first confirmation of the direct replacement of Fe by Ti within goethite. Formation of multiple dehydroxylation endotherms for goethite containing 4.5 mol.% Al, 15.3 mol.% Mn and 12.2 mol.% Ti was not attributed to the decomposition of surface OH groups or related simply to the crystallinity of precursor goethite (‘high-a’ vs. ‘low-a’) as defined by the magnitude of a. Instead, endotherm doublet formation was associated with weight loss due to the dehydroxylation of goethite remaining after initial phase transformation to protohematite and to the evolution of OH− associated with the rapid increase in crystallite size of protohematite directed primarily along the a direction. Development of the first endotherm is due to initial dehydroxylation and transformation to protohematite. With continued heating of well ordered goethite or goethite containing moderate to high levels of substituent cations, domain growth along the a direction is delayed or inhibited to a critical point that provides enough thermal energy to enable goethite transformation to proceed to completion and for proto-hematite domain growth to occur. This results in the formation of a second endotherm. For less well ordered goethite and/or goethite containing only low levels of foreign metal cations, protohematite domain growth is not inhibited and proceeds continuously with heating to give only a single endotherm.

Sepiolite is a hydrated magnesium silicate with a microporous and mesoporous structure. The fibrous morphology and the alternating blocks and tunnels along the fiber direction of sepiolite make it an ideal material to sequester a variety of organic and inorganic contaminants. The adsorption of various surfactants by organo sepiolites have been experimentally investigated. How this hydrophobic material adsorbs dye molecules at the atomic level, however, is a great mystery. For this reason, the present study focused on the adsorption of acid azo 57 dye molecules to modified sepiolite. For this purpose, the amenability of sepiolite to remove the anionic textile dye (acid azo red dye 57) was first studied in detail. Additionally, a typical cationic surfactant, hexadecyltrimethylammonium Br (HTAB), was used to modify sepiolite to increase the adsorption capacity. Zeta potential measurements on the sepiolite and the HTAB modified sepiolite were also carried out. Moreover, Density Functional Theory (DFT) studies were performed to understand the mechanism of the adsorption of dye molecules to natural and modified sepiolite surfaces. On the basis of the experimental studies, three general systems were theoretically examined: (i) HTAB molecules on sepiolite basal surfaces to represent four Si tetrahedra, (ii) neutral or charged acid azo red dye 57 molecules on sepiolite basal surfaces to represent four Si tetrahedra, and (iii) HTAB on the surface of neutral or charged acid azo red dye 57 molecules as a substrate. The results clearly indicated good agreement between the experimental studies and the theoretical computational DFT studies. For example, the double layer structure found in experimental studies was also demonstrated in DFT studies and confirmed increased adsorption in the presence of acid azo dye 57.

Clays have traditionally been linked to health care, being used for centuries in the fight against infections and diseases. Similarly, biohybrids produced by combinations of clays and biological species through ‘bottom-up’ approaches have been evaluated over the past decade for biomedical and pharmaceutical uses. These biohybrids show interesting features such as biocompatibility and biodegradability which make them suitable for healthcare applications. The aim of the present communication was to review recent research contributions describing progress and the role of biohybrid materials based on clays in biomedicine and pharmacy disciplines. Emphasis will be on the authors’ own experience of this topic, particularly on aspects related to controlled drug-delivery systems, adjuvants of vaccines, and vectors for non-viral gene transfection. Bionanocomposites offer several advantages for use in the design of new and efficient pharmacological formulations for cutaneous and oral administration. In these systems, the drug is typically entrapped in the clay and protected by a biopolymer matrix, and both components contribute to a gradual release of the drug. Clay-based hybrids have also shown their efficacy in vaccines as they can act as nanocarriers of viral particles, due to the biomimetic interface created on the clay surface after adsorption of suitable biomolecules such as phospholipids, while the clay acts as an adjuvant to increase the efficacy of the vaccine. Finally, a new application of clays as non-viral vectors for controlled gene delivery is attracting increasing interest in the treatment of diverse diseases; clays such as sepiolite have demonstrated their ability to act as nanocarriers of nucleic acids and facilitate their transfection in mammalian cells.

Shales have undergone a complex burial diagenesis that involved a severe modification of the pore structure. Reconstituted shales can provide new insights into the nature of the pore structure in natural materials. The effects of diagenesis on the microfabric, pore size distribution, and porosity of Opalinus shale were measured by comparing the behavior of natural and reconstituted specimens. The parent material (Opalinus shale) was reconstituted through multiple grinding operations, sedimentation from a dispersed slurry, and one-dimensional isothermal consolidation. This process produced uniform specimens that were not cemented and had replicable microfabric and engineering properties. The microfabric and mineralogy of the materials were examined using high-resolution scanning/backscattered electron microscopy (SEM/BSEM) and energy-dispersive X-ray spectroscopy (EDS) for specimens with broken and milled surfaces. Mercury intrusion porosimetry (MIP) and N2 adsorption were used to assess the pore size distributions and specific surface areas of the materials. The microstructure of natural shale was characterized to be highly heterogeneous with significant concentrations of calcareous microfossils, calcite, and quartz particles embedded within the clay matrix. The microfossils were observed to be locally infilled and rimmed by a calcite cement that showed evidence of dissolution. The reconstituted specimens showed a double-structure microfabric that evolved with the level of consolidation stress and converged into a single-structure material (comparable to the natural shale) at a consolidation stress of more than twice the estimated maximum in situ effective stress. The natural shale had a lower specific surface area in comparison to the reconstituted material, which was consolidated at large effective stresses. These differences can be attributed to cementation at a submicron pore scale and highlight chemical diagenesis effects that were not replicated in the reconstituted specimens.